Akhtyamova L, Martínez P, Verspoor K, Cardiff J. (2020) Testing Contextualized Word Embeddings to Improve NER in Spanish Clinical Case Narratives. IEEE Access.

In the Big Data era, there is an increasing need to fully exploit and analyze the huge quantity of information available about health. Natural Language Processing (NLP) technologies can contribute by extracting relevant information from unstructured data contained in Electronic Health Records (EHR) such as clinical notes, patients’ discharge summaries and radiology reports. The extracted

Wilson DJ, and The CRyPTIC Consortium. GenomeMap: Within-species genome-wide dn/ds estimation from over 10,000 genomes. Molecular Biology and Evolution 2020;37(8):2450-2460.

The dN/dS ratio provides evidence of adaptation or functional constraint in protein-coding genes by quantifying the relative excess or deficit of amino acid-replacing versus silent nucleotide variation. Inexpensive sequencing promises a better understanding of parameters, such as dN/dS, but analyzing very large data sets poses a major statistical challenge. Here, I introduce genomegaMap for estimating